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  • Description:
  • Effect of route of acquisition on microbiota composition (beta‐diversity). (a) Principal coordinate analysis of the Bray–Curtis dissimilarity and illustration of the within‐ and between‐colony distance calculation in (b). Top left: The shift in colony by treatment centroids of Naturals and Pool exposed show the overall effect of treatment. The data spread is illustrated by polygons. Top right: A specific colony (N1) is highlighted. Bottom left: The within‐colony distance for a single focal Pool exposed individual is calculated as the Bray–Curtis dissimilarity between the focal individual to all Naturals of the same colony. Bottom right: The between‐colony distance for a single focal Pool exposed individual is calculated as the Bray–Curtis dissimilarity between the focal individual and all Naturals of other colonies. (b) Illustration of the colony by treatment interaction reported in Table . The boxplots summarize the distribution of all within‐ (white boxes) and between‐ (grey boxes) colony Bray–Curtis dissimilarities, split by colony (see panel a). The direction of effect for each colony is indicated by the triangles on the horizontal axis. Downward (upward) facing triangles show the colonies for which microbiota composition in Pool exposed bees is more (less) similar to Naturals of the same colony than Naturals from other colonies. Significance was determined from empirical p‐values through a permutation test and is indicated by triangle fill colour (black: p < .05, grey p < .1). Each box shows the median and interquartile range (IQR), hinges extend 1.5 × IQR from the box and notches extend ± 1.58 IRR/n
  • License:
  • Rights Managed
  • Rights Holder:
  • John Wiley & Sons, Inc.
  • License Rights Holder:
  • Journal of Animal Ecology © 2018 British Ecological Society
  • Asset Type:
  • Image
  • Asset Subtype:
  • Chart/Graph
  • Image Orientation:
  • Portrait
  • Image Dimensions:
  • 2128 x 3304
  • Image File Size:
  • 901 KB
  • Creator:
  • Kathrin Näpflin, Paul Schmid‐Hempel, Christophe Eizaguirre
  • Credit:
  • Näpflin, K., Schmid‐Hempel, P., Arumugam, M., Raes, J., Pelletier, E., Le Paslier, D., Yamada, T., Mende, D. R., Bork, P., Bates, D., Maechler, M., Bolker, B. M., Walker, S. C., Brucker, R. M., Bordenstein, S. R., Buchon, N., Silverman, N., Cherry, S., Caporaso, J. G., Bittinger, K., Bushman, F. D., DeSantis, T. Z., Andersen, G. L., Knight, R., Caporaso, J. G. J., Kuczynski, J. J., Stombaugh, J. J., Bittinger, K. K., Bushman, F. D. F., Costello, E. K. E., Knight, R. R., Cariveau, D. P., Elijah Powell, J., Koch, H., Winfree, R., Moran, N. A., Chandler, J. A., Morgan Lang, J., Bhatnagar, S., Eisen, J. A., Kopp, A., Cole, J. R., Wang, Q., Fish, J. A., Chai, B., McGarrell, D. M., Sun, Y., Tiedje, J. M., Colman, D. R., Toolson, E. C., Takacs‐Vesbach, C. D., Costello, E. K., Stagaman, K., Dethlefsen, L., Bohannan, B. J. M., Relman, D. A., Dillon, R. J., Dillon, V. M., Edgar, R. C., Edgar, R. C., Edgar, R., Engel, P., James, R. R., Koga, R., Kwong, W. K., McFrederick, Q. S., Moran, N. A., Engel, P., Moran, N. A., Foxman, B., Goldberg, D., Murdock, C., Xi, C., Gilsdorf, J. R., Franzenburg, S., Walter, J., Kuenzel, S., Wang, J., Baines, J. F., Bosch, T. C. G., Fraune, S., Götzenberger, L., Bello, F., Bråthen, K. A., Davison, J., Dubuis, A., Guisan, A., Zobel, M., Graystock, P., Rehan, S. M., McFrederick, Q. S., Hakim, R. S., Baldwin, K., Smagghe, G., Hooper, L. V., Littman, D. R., Macpherson, A. J., Hothorn, T., Bretz, F., Westfall, P., Kamada, N., Chen, G. Y., Inohara, N., Nunez, G., Klindworth, A., Pruesse, E., Schweer, T., Peplies, J., Quast, C., Horn, M., Glöckner, F. O., Koch, H., Abrol, D. P., Li, J., Schmid‐Hempel, P., Koch, H., Schmid‐Hempel, P., Koch, H., Schmid‐Hempel, P., Koch, H., Schmid‐Hempel, P., Kwong, W. K., Medina, L. A., Koch, H., Sing, K.-W., Soh, E. J. Y., Ascher, J. S., Moran, N. A., Kwong, W. K., Moran, N. A., Lim, H. C., Chu, C.-C., Seufferheld, M. J., Cameron, S. A., Liu, C. M., Aziz, M., Kachur, S., Hsueh, P.-R., Huang, Y.-T., Keim, P., Price, L. B., Lundberg, D. S., Yourstone, S., Mieczkowski, P., Jones, C. D., Dangl, J. L., Martinson, V. G., Danforth, B. N., Minckley, R. L., Rueppell, O., Tingek, S., Moran, N. A., Martinson, V. G., Moy, J., Moran, N. A., Martiny, J. B. H., Bohannan, B. J. M., Brown, J. H., Colwell, R. K., Fuhrman, J. A., Green, J. L., Staley, J. T., McFrederick, Q. S., Thomas, J. M., Neff, J. L., Vuong, H. Q., Russell, K. A., Hale, A. R., Mueller, U. G., McFrederick, Q. S., Wcislo, W. T., Taylor, D. R., Ishak, H. D., Dowd, S. E., Mueller, U. G., McLoughlin, K., Schluter, J., Rakoff‐Nahoum, S., Smith, A. L., Foster, K. R., Mihaljevic, J. R., Mikaelyan, A., Thompson, C. L., Hofer, M. J., Brune, A., Murrell, D. C., Goerzen, D. W., Näpflin, K., Schmid‐Hempel, P., Näpflin, K., Schmid‐Hempel, P., Oksanen, J., Blanchet, F. G., Kindt, R., Legendre, P., Minchin, P. R., OHara, R. B., Wagner, H., Powell, J. E., Martinson, V. G., Urban‐Mead, K., Moran, N. A., Prosser, J. I., Bohannan, B. J. M., Curtis, T. P., Ellis, R. J., Firestone, M. K., Freckleton, R. P., Young, J. P. W., Pruesse, E., Peplies, J., Glöckner, F. O., Rawls, J. F., Mahowald, M. A., Ley, R. E., Gordon, J. I., Robinson, C. J., Bohannan, B. J. M., Young, V. B., Sanders, J. G., Powell, S., Kronauer, D. J. C., Vasconcelos, H. L., Frederickson, M. E., Pierce, N. E., Schmid‐Hempel, P., Puhr, K., Kruger, N., Reber, C., Schmid‐Hempel, R., Schmid‐Hempel, P., Reber Funk, C., Schmid‐Hempel, P., Schmid‐Hempel, R., Seedorf, H., Griffin, N. W., Ridaura, V. K., Reyes, A., Cheng, J., Rey, F. E., Gordon, J. I., Sekirov, I., Russell, S. L., Antunes, L. C. M., Finlay, B. B., Ulrich, Y., Sadd, B. M., Schmid‐Hempel, P., Vellend, M., Zilber‐Rosenberg, I., & Rosenberg, E. (2018). Host effects on microbiota community assembly. Journal of Animal EcologySpecial Feature: Animal host–microbe interactions, 87(2), 331-340. https://doi.org/10.1111/1365-2656.12768.
  • Collection:
  • Keywords:
  • Restrictions:
  • Property Release:
  • No
  • Model Release:
  • No
  • Purchasable:
  • Yes
  • Sensitive Materials:
  • No
  • Article Authors:
  • Kathrin Näpflin, Paul Schmid‐Hempel, Christophe Eizaguirre
  • Article Copyright Year:
  • 2018
  • Publication Volume:
  • 87
  • Publication Issue:
  • 2
  • Publication Date:
  • 03/01/2018
  • DOI:
  • https://doi.org/10.1111/1365-2656.12768

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