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Description Similarities of partial merA gene fragments of isolated bacteria to sequences reported in the literature
Article Title: Mercuric reductase genes (merA) and mercury resistance plasmids in High Arctic snow, freshwater and sea‐ice brine
Publication Title: FEMS Microbiology Ecology -
Description Phylogenetic consensus trees based on analyses of 16S rRNA gene sequences (≥1300 nucleotides) including sequences of representative clones and isolates (marked in bold) from enrichment cultures A–L...
Article Title: Diversity of sulfate‐reducing bacteria from an extreme hypersaline sediment, Great Salt Lake (Utah)
Publication Title: FEMS Microbiology Ecology -
Description Maximum likelihood tree of Bacteroidetes (CFB) 16S rRNA gene sequences from alpine and subalpine clone libraries.
Article Title: Relationships between temperature responses and bacterial community structure along seasonal and altitudinal gradients
Publication Title: FEMS Microbiology Ecology -
Description Effect of bait volume on mycelial extension rate (a and b) and biomass production rate (c and d) of mycelial systems of Stropharia caerulea growing from 0.5 cm3 wood inocula (a and c) to wood baits...
Article Title: Resource acquisition by the mycelial‐cord‐former Stropharia caerulea: effect of resource quantity and quality
Publication Title: FEMS Microbiology Ecology -
Description Changes in microbial population (bacteria, archaea and methanogens) across different sampling stages of compost‐applied rice‐field soil. Letters a, b, c and d, wherever common, indicate that the...
Article Title: Community structure of methanogenic archaea and methane production associated with compost‐treated tropical rice‐field soil
Publication Title: FEMS Microbiology Ecology -
Description Relative frequency distribution of the detected basidiomycetous laccase OTUs of the analyzed plots (D1, D2 and D0) and horizons (Oe, Oa, A and Bw) of the Dystric Cambisol from April 2006 (a) and...
Article Title: Response of recalcitrant soil substances to reduced N deposition in a spruce forest soil: integrating laccase‐encoding genes and lignin decomposition
Publication Title: FEMS Microbiology Ecology -
Description Vertical distribution of acetate‐utilizing sulfate‐reducing bacteria (left panel) and thiosulfate‐disproportionating bacteria (right panel) at the profundal site of Lake Stechlin (recorded December...
Article Title: Vertical distribution of sulfate‐reducing bacteria at the oxic‐anoxic interface in sediments of the oligotrophic Lake Stechlin
Publication Title: FEMS Microbiology Ecology -
Description Examples of bacterial colonisation of soil; after the addition of glucose (a), in topsoil sampled after harvest (b) and in subsoil (c). Scale bar represents 20 μm. Colonised microsites were...
Article Title: Spatial distribution of bacterial communities and their relationships with the micro‐architecture of soil
Publication Title: FEMS Microbiology Ecology -
Description Metabolic engineering of Pseudomonas with mini‐transposon vectors bearing excisable antibiotic resistances. In this scheme, the selection marker is placed within the transposon vector flanked by...
Article Title: Mini‐transposons in microbial ecology and environmental biotechnology
Publication Title: FEMS Microbiology Ecology -
Description Phylogenetic relationships of unique cloned sequences and bacterial isolates from the FRC and reference sequences from GenBank classified in the γ‐Proteobacteria. The tree was constructed as...
Article Title: Impacts on microbial communities and cultivable isolates from groundwater contaminated with high levels of nitric acid–uranium waste
Publication Title: FEMS Microbiology Ecology -
Description Phylogenetic relationships of permafrost isolates to cultured organisms in the public database
Article Title: Characterization of the microbial diversity in a permafrost sample from the Canadian high Arctic using culture‐dependent and culture‐independent methods
Publication Title: FEMS Microbiology Ecology -
Description RDA biplots. (a) Different bacterial groups [Betaproteobacteria (Bet), Alphaproteobacteria (Alph), Gammaproteobacteria (Gam), Bacteroidetes (Bctd), Actinobacteria (Act) and Eubacteria (Eub)] in...
Article Title: Effects of large river dam regulation on bacterioplankton community structure
Publication Title: FEMS Microbiology Ecology -
Description nMDS plot (two dimensional) of the 16S rDNA gene DGGE patterns of the bacterial community from water samples, showing the community changes (stress value: 18.5%). Objects are labelled according to...
Article Title: Characterization of microbial communities in the aqueous phase of a constructed model wetland treating 1,2‐dichloroethene‐contaminated groundwater
Publication Title: FEMS Microbiology Ecology -
Description Scytonemin concentrations (a), Chl a concentrations (b) and growth rates (c) for Nostoc punctiforme incubated in ND medium. Cultures were exposed to varying intensities of amber light (30–275 μmol...
Article Title: Effects of nitrogen source on the synthesis of the UV‐screening compound, scytonemin, in the cyanobacterium Nostoc punctiforme PCC 73102
Publication Title: FEMS Microbiology Ecology -
Description Rarefaction curves for the four clone libraries.
Article Title: Characterization of bacterial communities in four freshwater lakes differing in nutrient load and food web structure
Publication Title: FEMS Microbiology Ecology -
Description Sporulation index for B. aclada on necrotic onion leaf tips and frequency (%) of adjacent living tissues colonized
Article Title: Biocontrol agents efficiently inhibit sporulation of Botrytis aclada on necrotic leaf tips but spread to adjacent living tissue is not prevented
Publication Title: FEMS Microbiology Ecology -
Description Doubling times (Dt) of the prokaryotic assemblage in each pond throughout the salinity gradients of La Trinitat and Bras del Port salterns in different years. The values of heterotrophic...
Article Title: The microbial food web along salinity gradients
Publication Title: FEMS Microbiology Ecology -
Description Representative electropherograms from TRF analysis (T‐RFLP) of 16S rRNA gene fragments amplified from total DNA extracts (treatment 1) and from bromodeoxyuridine‐labeled DNA (treatments 2–5)...
Article Title: Use of bromodeoxyuridine immunocapture to identify psychrotolerant phenanthrene‐degrading bacteria in phenanthrene‐enriched polluted Baltic Sea sediments
Publication Title: FEMS Microbiology Ecology -
Description Specific degradation rates of DMSP‐cleaving and DMSP‐demethylating populations of microorganisms, assuming a maximum specific degradation rate (Vmax) of 188 and 17 nmol DMSP mg protein−1 min−1 for...
Article Title: Microbial production and consumption of dimethyl sulfide (DMS) in a sea grass (Zostera noltii)‐dominated marine intertidal sediment ecosystem (Bassin d'Arcachon, France)
Publication Title: FEMS Microbiology Ecology -
Description Components of the population metagenome that differ in flexibility as a result of variation in continuity of the shaping selective forces.
Article Title: Patchy distribution of flexible genetic elements in bacterial populations mediates robustness to environmental uncertainty
Publication Title: FEMS Microbiology Ecology -
Description Consensus tree showing the phylogenetic relationship of deduced DsrAB amino acid sequences including sequences of isolates and representative clone sequences derived from enrichment cultures A–L...
Article Title: Diversity of sulfate‐reducing bacteria from an extreme hypersaline sediment, Great Salt Lake (Utah)
Publication Title: FEMS Microbiology Ecology -
Description Phylogenetic tree showing the positions of 16S rDNA phylotypes affiliated with Bacilli (A), Mycoplasma (B) and Anaerobaculum thermoterrnum cluster (C) in the low‐G+C Gram‐positive bacteria,...
Article Title: Molecular analysis of bacterial microbiota in the gut of the termite Reticulitermes speratus (Isoptera; Rhinotermitidae)
Publication Title: FEMS Microbiology Ecology -
Description Ordination diagrams from RDA of (a) bacterial, (b) fungal, (c) archaeal and (d) actinobacterial T‐RFLP profiles with environmental variables represented as bold arrows and TRFs represented as...
Article Title: Multiple profiling of soil microbial communities identifies potential genetic markers of metal‐enriched sewage sludge
Publication Title: FEMS Microbiology Ecology -
Description Bifidobacteria concentrations in the intestinal suspension from the colon vessels during start‐up (n= 5), 5 weeks of treatment with inulin at doses of 2.5 g d−1 (n= 5) and control period (n= 3)a
Article Title: Prebiotic effects of chicory inulin in the simulator of the human intestinal microbial ecosystem
Publication Title: FEMS Microbiology Ecology -
Description Canonical roots provided by stepwise discriminant analyses (SDA) run for discriminating amino acids between the protozoa Balanion (▵) and Urotricha (□), and their algal diet Cryptomonas (•). See...
Article Title: Biochemical composition of algivorous freshwater ciliates: You are not what you eat
Publication Title: FEMS Microbiology Ecology -
Description UVR affects the phycobilisome content of Nostoc sp. Cells were irradiated in BG 11 medium in Petri dishes (UV‐A: 27.04 W m−2; UV‐B: 28.7 W m−2). The exposure time is indicated in the corresponding...
Article Title: Ultraviolet radiation induces both degradation and synthesis of phycobilisomes in Nostoc sp.: a spectroscopic and biochemical approach
Publication Title: FEMS Microbiology Ecology -
Description Comparison of archaeal and bacterial populations in #AR39 (a) and #SR123 (b) oil deposits. To reproduce and compare the population of archaeal and bacterial inhabitants in #AR39 and #SR123 oil...
Article Title: Microbial diversity with dominance of 16S rRNA gene sequences with high GC contents at 74 and 98 °C subsurface crude oil deposits in Japan
Publication Title: FEMS Microbiology Ecology -
Description Principal components analysis generated using from a presence/absence binary matrix of (a) all functional genes, and (b) functional genes related to metal resistance (arsB/C, czc, copA/B, mt)....
Article Title: Quantification of changing Pseudomonas aeruginosa sodA, htpX and mt gene abundance in response to trace metal toxicity: a potential in situ biomarker of environmental health
Publication Title: FEMS Microbiology Ecology -
Description Oligonucleotide probes, sequences, target sites, specificities, and formamide concentrations used in FISH. 16S rRNA sequences (at the probe target sites) of Archaeal clones used to determine the...
Article Title: Biodiversity and composition of methanogenic populations in the rumen of cows fed alfalfa hay or triticale straw
Publication Title: FEMS Microbiology Ecology -
Description Hydrogen consumption in a sediment slurry from the Norman landfill site. The inset shows the corresponding semilogarithmic plot.
Article Title: In situ hydrogen consumption kinetics as an indicator of subsurface microbial activity
Publication Title: FEMS Microbiology Ecology